| Entry information | 
|---|
 | Entry name | VE6_HPV16 | 
 | Primary accession | P03126 | 
 | Secondary accessions | Q71BI7 | 
 | integrated into UniProtKB/Swiss-Prot | 21 July 1986 | 
 | sequence version 1 | 21 July 1986 | 
 | entry version 76 | 23 March 2010 | 
 | Name and origin of the protein | 
|---|
 | Protein name | Protein E6 | 
 | Gene names |  | 
 | From | Human papillomavirus type 16 (Taxon ID: 333760) | 
 | Taxonomy | Viruses; dsDNA viruses, no RNA stage; Papillomaviridae; Alphapapillomavirus | 
 | Keywords | 3D-structure; Activator; DNA-binding; Early protein; Host nucleus; Host-virus interaction; Metal-binding; Oncogene; Transcription; Transcription regulation; Zinc; Zinc-finger | 
 | References | 
|---|
 | 1 | Seedorf K., Krammer G., Durst M., Suhai S., Rowekamp W.G.;  "Human papillomavirus type 16 DNA sequence."  Virology 145:181-185(1985) 
 | 
 | 2 | Terai M., Fu L., Ma Z., Burk R.D.;  "Cloning and sequencing of non-European human papillomavirus (HPV) variant complete genomes from cervicovaginal cells by an overlapping PCR method."  Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases 
 | Reference Position | nucleotide sequence [genomic dna]. |  | Reference Comment | strain=isolate european german 131 | 
 | 
 | 3 | Schneider-Maunoury S., Pehau-Arnaudet G., Breitburd F., Orth G.;  "Expression of the human papillomavirus type 16 genome in SK-v cells, a line derived from a vulvar intraepithelial neoplasia."  J. Gen. Virol. 71:809-817(1990) 
 | MEDLINE | 90218027 |  | PubMed | 2157796 |  | Reference Position | nucleotide sequence [genomic dna] of 31-50. | 
 | 
 | 4 | Du M., Fan X., Hong E., Chen J.J.;  "Interaction of oncogenic papillomavirus E6 proteins with fibulin-1."  Biochem. Biophys. Res. Commun. 296:962-969(2002) 
 | 
 | 5 | Gewin L., Myers H., Kiyono T., Galloway D.A.;  "Identification of a novel telomerase repressor that interacts with the human papillomavirus type-16 E6/E6-AP complex."  Genes Dev. 18:2269-2282(2004) 
 | 
 | 6 | Thomas M., Laura R., Hepner K., Guccione E., Sawyers C., Lasky L., Banks L.;  "Oncogenic human papillomavirus E6 proteins target the MAGI-2 and MAGI-3 proteins for degradation."  Oncogene 21:5088-5096(2002) 
 | 
 | 7 | Lee C., Laimins L.A.;  "Role of the PDZ domain-binding motif of the oncoprotein E6 in the pathogenesis of human papillomavirus type 31."  J. Virol. 78:12366-12377(2004) 
 | 
 | 8 | Massimi P., Gammoh N., Thomas M., Banks L.;  "HPV E6 specifically targets different cellular pools of its PDZ domain-containing tumour suppressor substrates for proteasome-mediated degradation."  Oncogene 23:8033-8039(2004) 
 | 
 | Comments | 
|---|
 | function | Transcriptional transactivator. Binds double stranded DNA. Has transforming activity. Inactivates, with E6-AP ubiquitin-
 protein ligase, the human TP53/p53 tumor suppressor protein by
 targeting it to degradation. Binds and targets human MUPP1/MPDZ
 protein to degradation. Those two functions presumably contribute
 to transforming activity (By similarity). Interaction with human
 FBLN1 protein also seems to be linked to cell transformation. | 
 | subunit | Forms a complex with E6-AP ubiquitin-protein ligase which interacts with human P53. Binds to human FBLN1 and MPDZ (By
 similarity). Interacts with human NFX1 and MAGI3. | 
 | interaction | O15350-1:TP73 (xeno); NbExp=1; IntAct=EBI-1177242, EBI-389619;
 O15350-2:TP73 (xeno); NbExp=1; IntAct=EBI-1177242, EBI-389623; | 
 | subcellular location | Host nucleus matrix. | 
 | miscellaneous | HPV16, in comparison to HPV types 6 and 11, is more often associated with malignant genital cancers in humans. | 
 | similarity | Belongs to the papillomaviridae E6 protein family. | 
 | Copyright | 
|---|
 | Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms Distributed under the Creative Commons Attribution-NoDerivs License | 
 | Cross-references | 
|---|
 | EMBL | K02718; AAA46939.1; -; Genomic_DNA. | 
 | AF536179; AAQ10712.1; -; Genomic_DNA. | 
 | D00735; BAA00632.1; -; Genomic_DNA. | 
 | PIR | A03682; W6WLHS. | 
 | RefSeq | NP_041325.1; -. | 
 | PDB | 1VZN; Model; -; A=1-158. | 
 | 2FK4; NMR; -; A=88-158. | 
 | PDBsum | 1VZN; -. | 
 | 2FK4; -. | 
 | IntAct | P03126; 5. | 
 | MINT | MINT-96563; -. | 
 | GeneID | 1489078; -. | 
 | GO | ; C:host cell nuclear matrix; IEA:UniProtKB-SubCell. | 
 | ; F:DNA binding; IEA:UniProtKB-KW. | 
 | ; F:protein binding; IPI:IntAct. | 
 | ; F:zinc ion binding; IEA:UniProtKB-KW. | 
 | ; P:cellular transcription; IEA:UniProtKB-KW. | 
 | ; P:interspecies interaction between organisms; IEA:UniProtKB-KW. | 
 | ; P:regulation of cellular transcription; IEA:UniProtKB-KW. | 
 | InterPro | IPR001334; E6. | 
 | Pfam | PF00518; E6; 1. | 
 | Features | 
|---|
 | | Key | From | To | Length | Description | 
|---|
 | chain | 1 | 158 | 158 | Protein E6. /FTId=PRO_0000133336.
 |  | zn_fing | 37 | 73 | 37 | Potential. |  | zn_fing | 110 | 146 | 37 | Potential. |  | motif | 155 | 158 | 4 | PDZ-binding (By similarity). |  | conflict | 17 | 17 | 1 | R -> G (in Ref. 2; AAQ10712). |  | conflict | 90 | 90 | 1 | L -> V (in Ref. 2; AAQ10712). |  | strand | 87 | 90 | 4 |  |  | helix | 93 | 100 | 8 |  |  | turn | 101 | 105 | 5 |  |  | strand | 111 | 113 | 3 |  |  | helix | 119 | 128 | 10 |  |  | strand | 132 | 135 | 4 |  |  | strand | 138 | 141 | 4 |  |  | helix | 142 | 146 | 5 |  | 
 | 
 | Sequence information | 
|---|
 | Length: 158 aa, molecular weight 19187 Da, CRC64 checksum 01FEF5ADCFDB37EB | 
 | MHQKRTAMFQ DPQERPRKLP QLCTELQTTI HDIILECVYC KQQLLRREVY DFAFRDLCIV
YRDGNPYAVC DKCLKFYSKI SEYRHYCYSL YGTTLEQQYN KPLCDLLIRC INCQKPLCPE
EKQRHLDKKQ RFHNIRGRWT GRCMSCCRSS RTRRETQL |